BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D02LP1|AL428531
(517 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig502 417 e-116
>3x_Contig502
Length = 1468
Score = 417 bits (200), Expect = e-116
Identities = 224/238 (94%)
Strand = Plus / Minus
Query: 1 aatcaatagttttaccattaaactatatcctctttacccgcgctaatgggtcatctaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 aatcaatagttttaccattaaactatatcctctttacccgcgctaatgggtcatctaccc 652
Query: 61 ccatatagggggtggatgaacccgcgcggggagtatataataattattattatcatcmcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 651 ccatatagggggtggatgaacccgcgcggggagtatataataattattattattattaat 592
Query: 121 ccctmcccaaccttcctcaccttcaatatctgcgcaccatgtgtgcaacabgaaggtgag 180
||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 591 tcctacccaaccttcctcaccttcaatatctgcgcaccatgtgtgcaacaggaaggtgag 532
Query: 181 catgttatgggttggggggatatmattmtyammttmcccataatattgggtagaataa 238
||||||||||||||||||||||| ||| | | || ||||||||||||||||||||||
Sbjct: 531 catgttatgggttggggggatataattattaaattacccataatattgggtagaataa 474
Score = 138 bits (66), Expect = 1e-32
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 259 atattmatmagcccaccgcagttcccctacggtaactgtmtttcmacttcgcattamttc 318
||||| || |||||||||||||||||||||||||||||| |||| ||||||||||| |||
Sbjct: 453 atattaataagcccaccgcagttcccctacggtaactgtatttcaacttcgcattaattc 394
Query: 319 gtmatatttcttctatat 336
|| |||||||||||||||
Sbjct: 393 gtaatatttcttctatat 376
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.721 1.36
Gapped
Lambda K H
1.45 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,219
Number of Sequences: 1807
Number of extensions: 23219
Number of successful extensions: 6723
Number of sequences better than 1.0e-20: 1
length of query: 517
length of database: 10,358,551
effective HSP length: 16
effective length of query: 501
effective length of database: 10,329,639
effective search space: 5175149139
effective search space used: 5175149139
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 48 (100.5 bits)